Amaumi Haruhiko is a high school student who attends Shimano Academy in a town called Narasakicho. Narasakicho contains an unknown rainbow which constantly overlooks the town and is related to granting a magical wish called "Gift." Gift is a once-in-a-lifetime present between two people. As a child, Haruhiko has been close with his childhood friend, Kirino, until he obtains a new non-blood sister by the name of Riko. Haruhiko develops a strong relationship with Riko until they sadly depart due to the fact Haruhiko's father could no longer support the two of them. After some times passes by, Riko finally returns to the town of Narasakicho, and along with Kirino, starts to attend Shimano Academy with Haruhiko. The series revolves around the relationship among these main protagonists and slowly reveals the story behind both Gift and the rainbow.

Saiki Misaki has been able to see ghosts since she was a kid. Now, working at an S&M club, her spare time goes to sending the spirits off to the other world by having to make them realize they're dead and have to leave. This would supposedly be a little bit easier if you didnt have a background of hardship and loneliness... and a perverted employer.

The end of the demon wars has ended and now the Flower Division has been able to rest up after their fighting. The second Sakura Wars developes studies on every Flower Division Combatee in every episode while they go on their miscellanious adventures around Japan.

The Layzner OVA serves as an alternative version of the TV series. The first episode, titled "Eiji 1996", recaps the first part of the series (episodes 01-24). The second episode ("Le Caine 1999") takes place after a time skip, and contains episodes 26 through 37 (episode 25 of the TV series, being a recap itself, is skipped here). The final episode, "Seal 2000", is an expanded version of the final episode of the TV series (38) and features new animation and a longer epilogue.