The story takes place in a city where it's said that has thousands of levels. In a shutdown area, thousands of levels overlap each other, you couldn't tell the sky from the ground and you couldn't tell which way is up or which way is down. Maybe the original purpose of this story is to unravel the mysteries bound in this time and world. For the humans who found this vast rare multi-level city, the mysterious main character "Kirii" wanders to search for the "Net Terminal Genes" that were not infected. Kirii's burden and his search for the "Net Terminal Genes" is a goal like no other and is very much the mystery of this story. Log1~Log6 contains the story of Cibo that wasn't done in the original works. The Cibo who strayed away with Kirii and wanders about. A disc thrown away in the rubble. Cibo starts downloading. Just who's "Memory" will he end up with? Note: These clips are meant as a bonus to the manga, and should only be taken as such. Do not expect any plot in these. They are merely animated (short) scenes from the manga.

The Chosen Children are in shock after the betrayal of Meicoomon, the digital monster who had recently joined their group alongside her human partner, Meiko Mochizuki. Koushirou Izumi is determined to diagnose the infection that took control of Meicoomon. Meanwhile, Takeru Takaishi realizes that his own partner, Patamon, is starting to exhibit alarming symptoms similar to that of other infected Digimon, like Meicoomon.

Just then, the Chosen Children receive a message from the mysterious entity Homeostasis, who informs them that their world is in danger of total destruction—and the Digital World, the home of the Digimon, is too. Homeostasis plans to enact a "Reboot," which will reset all the data that makes up the Digital World and eradicate the infection. However, the Reboot will also erase the memories of all Digimon, including the Childrens' partners. Can the Chosen Children stop Meicoomon before the Reboot becomes necessary, or is this the end of their time together with their Digimon?

[Written by MAL Rewrite]

Yukiya, who is "probably" 14 years old, spends his time DJ-ing alone. Due to his father's influence, he's listened to house music since he was young, and he uploads videos online. He wants to convey something to someone. He wants to be recognized, and become important. But getting hurt is scary. One day, while trying to get more views, he does something that can't be undone. And he sees a live broadcast from "that world." Yukiya believes he can't do anything alone, but that he could accomplish something if he were doing it together with someone else. (Source: ANN)

As the relationship between Mahoro, Suguru and his classmates develops further, another android girl enters their lives and becomes attached to Mahoro. All the while, the number of days before Mahoro is to shut down decreases steadily. (Source: ANN)