August 1945. In a converted theological seminary on the outskirts of Nagasaki, a young doctor works to help his patients, as unsettling news comes of a new weapon used by the Americans on the city of Hiroshima. When the second nuclear weapon is dropped on Nagasaki, the hospital staff must work to save lives in the midst of the concentric circles of death that their city has become.

In 2099, Earth has shifted off its axis and begins to rotate at an angle of 90% to the 20th-century equator. Three years of natural disasters follows, and when things settle down, Earth's ten billion population has died and only two million moon colonists remain. Some return to begin the repopulation of the world in seven new cities and the remaining colonists of the moon fear that their former neighbors might pose a threat and construct a ring of defensive satellites to trap them on the newly repopulated homeworld.

In C.E.75, the fighting still continues. There are independence movements, and aggression by Blue Cosmos... In order to calm the situation, a global peace monitoring agency called COMPASS is established, with Lacus as its first president. As members of COMPASS, Kira and his comrades intervene into various regional battles. Then a newly established nation called Foundation proposes a joint operation against a Blue Cosmos stronghold.

New project.